mxfda: A Functional Data Analysis Package for Spatial Single Cell Data

Methods and tools for deriving spatial summary functions from single-cell imaging data and performing functional data analyses. Functions can be applied to other single-cell technologies such as spatial transcriptomics. Functional regression and functional principal component analysis methods are in the 'refund' package https://cran.r-project.org/package=refund while calculation of the spatial summary functions are from the 'spatstat' package https://spatstat.org/.

See also

Useful links:

• https://github.com/julia-wrobel/mxfda/

• http://juliawrobel.com/mxfda/

• Report bugs at https://github.com/julia-wrobel/mxfda/issues/

Author

Maintainer: Alex Soupir alex.soupir@moffitt.org (ORCID)

Authors:

• Julia Wrobel julia.wrobel@emory.edu (ORCID)